Slide 1

Slide 1 text

1 NOTATION FOR FDA Jeff Goldsmith, PhD Department of Biostatistics

Slide 2

Slide 2 text

2 What are “Functional Data”? Tentative definition: Observations on subjects that you can imagine as Xi (ti ), where ti is continuous Functional notation is conceptual; observations are made on a finite discrete grid.

Slide 3

Slide 3 text

3 • High dimensional • Temporal and/or spatial structure • Interpretability across subject domains Characteristics of FD

Slide 4

Slide 4 text

4 • Conceptually, we regard functional data as being defined on a continuum, e.g. Xi(t), 0 < t <1 • In practice, functional data are observed at a finite number of points • Observation grid is often regular and dense – many observations for each subject, all over a common collection of time points –Minute of the day • At each observation point t, Xi(t) has a distribution Discretization

Slide 5

Slide 5 text

5 • Suppose we have functional data • Mean: • The mean is itself functional • Typically, we assume that the mean is smooth. • “Raw'' estimator is sample mean: • A typical estimator of would be a smoothed version of this Summaries of FD {Xi(t), t 2 [0, 1], i = 1, . . . , n} µ(t) = E [Xi(t)] 1 n X Xi(t) µ(t)

Slide 6

Slide 6 text

6 • Suppose we have functional data • Variance: • This is a (two-dimensional) surface • “Raw'' estimator is sample covariance: • Would need to smooth this as well. Summaries of FD {Xi(t), t 2 [0, 1], i = 1, . . . , n} ⌃(s, t) = Cov(X(s), X(t)) = E [(X(s) µ(s))(X(t) µ(t))] ˆ ⌃(s, t) = Cov(Xi(s), Xi(t))

Slide 7

Slide 7 text

7 • Spaghetti plots • Rainbow plots • Lasagna plots Data displays

Slide 8

Slide 8 text

8 Switch to code

Slide 9

Slide 9 text

9 Code

Slide 10

Slide 10 text

10 Code

Slide 11

Slide 11 text

11 Code

Slide 12

Slide 12 text

12 Code