Jupyter's Phenomenal Growth

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  Jupyter Team Carol Willing SD Meetup March 20, 2019 @WillingCarol Jupyter's Phenomenal Growth: What's next

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Tools and Community @WillingCarol

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Data Science & Science PyData AI Machine Learning Visualization Fernando Perez Creator, IPython & Jupyter

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Project Jupyter Mission

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Learning and computational ideas Usability Reproducibility Collaboration Prediction Recommendation Classification

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Jupyter Notebook A Jupyter Notebook document with a visualization of measles data.

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Anatomy of a notebook http://adamrule.com/files/papers/chi_2018_computational_notebooks_final_web.pdf https://blog.jupyter.org/we-analyzed-1-million-jupyter-notebooks-now-you-can-too- guest-post-8116a964b536 Structure and design • Adam Rule et al. • analyzed 1 million notebooks • design opportunities

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jupyter.org

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Jupyter ‣ Growth ‣ ACM Award ‣ Industry adoption ‣ Creative uses ‣ Open Source Book

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Notebooks and Workflows @WillingCarol

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JupyterLab Try it on Binder. next-generation, web-based, extensible user interface for Jupyter

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Introduction to Mechanical Vibration (Jason Moore & Kenneth Lyons) http://www.moorepants.info/blog/introducing-resonance.html

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nteract ReactJS front end

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nteract Enterprise data workﬂows

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Cloud and Groups @WillingCarol

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zero-to-jupyterhub.readthedocs.io

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@WillingCarol JupyterHub: Deploy with Kubernetes https://zero-to-jupyterhub.readthedocs.io/en/latest/

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Architecture authenticators, spawners, services

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  Digital Ocean Jetstream Google Cloud AWS Your Ubuntu 18.04 server @WillingCarol

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Documentation @WillingCarol the-littlest-jupyterhub.readthedocs.io

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https://blog.jupyter.org/binder-2-0-a-tech-guide-2017-fd40515a3a84 https://elifesciences.org/labs/8653a61d/introducing-binder-2-0-share-your- interactive-research-environment https://www.nature.com/articles/d41586-018-01322-9 mybinder.org

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Build your own BinderHub https://binderhub.readthedocs.io/en/latest/

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BinderHub Architecture

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repo2docker https://repo2docker.readthedocs.io

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Interactivity and Visualization @WillingCarol

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‣ High level: WebAssembly and Javascript ‣ Low level: Rust ‣ wasm-bindgen wasm-pack ‣ Install using pip Improving Jupyter widgets and using with Python

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https://youtu.be/5dl_m_6T2bU?t=7

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https://github.com/data- exp-lab/rust-yt-tools/ npm package @data- exp-lab/yt-tools Irber Junior LC. Oxidizing Python: writing extensions in Rust [version 1; not peer reviewed]. F1000Rese arch 2018, 7(ISCB Comm J):955 (poster) (https://doi.org/ 10.7490/ f1000research. 1115726.1) https://github.com/ munkm/widgyts

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ipyvolume https:// towardsdatascience.com/ multivolume-rendering-in- jupyter-with-ipyvolume- cross-language-3d- visualization-64389047634a

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https://mybinder.org/v2/gh/willingc/pydy-tutorial-human-standing/master https://github.com/ pydy/pydy-tutorial- human-standing Animation

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https://mybinder.org/v2/gh/willingc/pydy-tutorial-human-standing/master https://github.com/pydy/pydy-tutorial-human-standing

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San Diego @WillingCarol

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https://zonca.github.io/ @WillingCarol

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http://genepattern-notebook.org/ @WillingCarol

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https://www.westhealth.org/ resource/data-science-overview/ @WillingCarol

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https://tinyletter.com/TrackingJupyter @WillingCarol

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https://jupyter4edu.github.io/jupyter-edu-book/ @WillingCarol

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Matplotlib documentation Carol Willing papers and photos Project Jupyter nteract project Python website Fernando Perez website ipyvolume project yt project and Madickin