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Data Citation Support in Reference Managers: Zotero as an Example Martin Fenner Technical Lead Article-Level Metrics Public Library of Science Open Metrics

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• Policy • Training • Data Repositories • Data Citation • Indexing and Linking Moving from citable to cited
 Heather Piwowar 2 Data Citation Implementation

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The genome of the bacterium responsible for the severe 2011 outbreak of hemolytic uremic syndrome in Germany

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AFOB00000000

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gb: AFOB00000000

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AFOB0000000 Markup in PubMed Central http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3140518/

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Escherichia coli O104:H4 str. LB226692, whole genome shotgun sequencing project. 2013 Nov 19 [cited 2015 Jan 11]; 
 Available from: http://www.ncbi.nlm.nih.gov/ nuccore/AFOB00000000.2 Citation using Vancouver Style

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Who • authoring (the researcher) • curation (the publisher, data center, indexing service, …) How • discoverable • low barriers 8 Criteria for implementing 
 Data Citation

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This Workshop • Endnote • Papers • Mendeley • CiteULike • Zotero 9 Data Citation needs Reference Manager Support

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10 Reference Manager Data Citation support is Many-to-Many Problem Thousands of data repositories and multiple reference managers Possible Solutions • central data citation index(es) • common framework for importing dataset metadata (similar to what Citation-Style Language has done for formatting citations)

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11 https://github.com/zotero/translators An open source framework for importing references from web pages

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12 https://github.com/zotero/translators/blob/master/NCBI%20Nucleotide.js Zotero NCBI Nucleotide Translator

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13 http://www.ncbi.nlm.nih.gov/nuccore/?term=Escherichia+coli+O104%3AH4 Extract references from search results

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APA Style Escherichia coli O104:H4 str. LB226692, whole genome shotgun sequencing project. (2013). (Version 2). Retrieved from http://www.ncbi.nlm.nih.gov/nuccore/ AFOB00000000.2 Pitfalls/Questions • dumbing down the metadata back into text • separate reference list section for data citations? • indexing services not picking up data citations 14 Problem solved once dataset is in the reference manager?

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This presentation is made available under a CC-BY 4.0 license. http://creativecommons.org/licenses/by/4.0/