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• 2017: conception at BioC2017 • 2018: first workshop ^_^ • 2019: maintaining momentum https://comunidadbioinfo.github.io/ Community of Bioinformatics Software Developers Leonardo Collado Torres @fellgernon lcolladotor.github.io

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@lcgunam

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@cendrinou https://www.stat.berkeley.edu/users/sandrine/ Sandrine Dudoit Fall 2007

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Who knows about ? Sandrine Dudoit: She’s one of the @Bioconductor project founders! @cendrinou

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http://www.wholebiome.com/team.html#james-bullard James Bullard January 2008 1 week intense course

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@AlexielMedyna http://liigh.unam.mx/profile/dra-alejandra-medina-rivera/ Alejandra Medina Rivera BioC2008 Developer’s day + 2 conference days Supported by @lcgunam

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@fellgernon & Osam http://lcolladotor.github.io/courses/Courses/R/ Fall 2008

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@areyesq http://alejandroreyes.org/ Alejandro Reyes (first BioC: 2009) BioC2009 + BioC2010 + BioC2011 Developer’s day + 2 conference days + Europe Bioc 2010 http://www- huber.embl.de/biocdeveleurope2010/ With support from: @Bioconductor, @lcgunam, @WINTERGENOMICS

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Always ask for support! • Support for traveling or registration or lodging • Support for teaching: Robert Gentleman gave me free copies of books he had in his office (authors normally get several free copies of books) • Support for community building: almost had Bioconductor’s support in 2010ish for 1 visit, we didn’t give up! #CDSBMexico • Feel free to ask for help! We all started somewhere!! Check your spam box and filters: • Almost lost a scholarship for user!2013 that way :P

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Check the dates for applying for support! Ask for emails and keep in touch • I asked for PhD application and career advice to Davis McCarthy @davisjmcc in 2010 • That’s how I got into my PhD Socialize! Take advantage of opportunities offered to you!

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BioC2010 First time presenting a poster about an R package (BacterialTranscription): Transcription initiation mapping and transcription unit identification in E. coli Rafael Irizarry https://rafalab.github.io/ @rafalab Ingo Ruczinski http://www.biostat.jhsph.edu/~iruczins/ Them: Have you heard about Johns Hopkins? Me: Johns???? No idea Them: come join us at @jhubiostat !!

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Data from the last 667 submitted to Bioconductor through Github (Made in 2018) Alejandro Reyes @areyesq http://alejandroreyes.org/ BioC2017

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http://congresos.nnb.unam.mx/

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Interested → Users → Developers How can we enable this step in LA/Mexico?

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Comunidad de Desarrolladores de Software en Bioinformática ● Community as a (virtual) university department. ● Constructive discussion of novel ideas. ● Exchange of expertise and multidisciplinary collaborations. ● Remove barriers for beginners (mentoring) ● More access to specialized training for Latin American talent. https://comunidadbioinfo.github.io/ Community of Bioinformatics Software Developers

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Latin American R/Bioconductor Developers Workshop 2018 ● Kick-starting event of the community. ● Teach participants the principles of reproducible data science through the development of R/Bioconductor packages. ● Turn bioinformatic software users into software developers. ● Continue with similar workshops in the future

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Martin Morgan Bioconductor Benilton Carvalho Uni Campinas Selene Fernandez LANGEBIO Alicia Mastretta Yanes CONABIO María Teresa Ortíz CONABIO Ale Medina LIIGH Alejandro Ponce CONABIO Leo Collado LIBD/Johns Hopkins Heladia Salgado CCG Laura Gomez CCG Daniela Ledezma CCG Alejandro Reyes DFCI/Harvard YOU YOU YOU

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https://twitter.com/CDSBMexico/status/1138473285899833345

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There are many communities you can join! Ask for help / support / #rstats love ^_^

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#Rladies @RLadiesGlobal

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Check #runconf18 @rOpenSci

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This is where it starts for you and us: #CDSBMexico @CDSBMexico It’s your home now! Help us build it and maintain it! Submit your blog posts too!

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Código de Conducta comunidadbioinfo.github.io/ codigo-de-conducta/ Estamos aquí para aprender, no para otra cosa. Hay que asegurárnos de que todos seamos bienvenidos

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