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Example 4: Incomplete assembly
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# Contigs 7
# Bases 5,130,210
N50 2,594,109
Max contig length 2,594,109
Contigs > 10,000 bp 5
Contig id Size BLAST® hits coverage of raw reads
0007 7,298 possibly rRNA with high repeats ~35x
0008 95,929 pRSB107 like plasmid 70x **
0009 2,594,109 Ends map to Enterobacteria phage DNA * 117x
0010 1,252,695 Ends map to Enterobacteria phage DNA * 106x
0011 1,157,888 Ends map to Enterobacteria phage DNA * 107x
0012 16,801 76% match to an Enterobacteria phage at high identity ~100x
0013 5,490 96% match to an Enterobacteria phage at high identitiy ~10x
** plasmid DNA not 1:1 with genomic DNA