| gawk 'BEGIN{OFS="\t"}{if (NF == 3) {;} else if ($6 ~ / ^[0-9]*M/){ print 0 } else if ($6 ~ /^[0-9]*S/){print gensub(/ ^([0-9]*)S.*\$/, "\\1", "1", $6)} else {print "Error", $6}}'" • samtoolsͰ+ʢਖ਼ํʣͷϦʔυͷΈΛऔΓग़͢ • gawkͰ • 1. ϔομʔใແࢹ • 2. ࠷ॳ͕ࣈͱϚονͰ࢝·͍ͬͯͨΒ0ϕʔεΛग़ྗ • 3. ࠷ॳ͕ࣈͱιϑτΫϦοϓͰ࢝·͍ͬͯͨΒɺ1൪ʹݟ͔ͭͬͨจࣈྻΛஔ ͯ͠ࣈ෦ͷΈΛग़ྗ͢Δ • 4. ͦΕҎ֎Τϥʔใࠂ