citing data using JATS

how to map data citation to JATS tags.

Transcript

1. What’s the smallest thing we can do,
   that can have the biggest effect?
   

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2. Is it a Bird? Is it a Plane?
   in reference list:
   publication-type="other"
   Tagged as
   Journal
   http://europepmc.org/articles/
   PMC3646594
   publication-type="thesis"
   http://europepmc.org/articles/
   PMC3722494
   publication-type="webpage"
   http://europepmc.org/articles/
   PMC3626513
   publication-type="journal"
   http://europepmc.org/articles/
   PMC3661987
   Placenta
   Gigascience
   Frontiers in Physiology
   Optical Express
   with thanks to @jomacyntyre
   F1000
   publication-type="book"
   

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3. Let’s all tag data the same way!!
   

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4. JATS
   

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5. Proposal A - Best Practice
   Proposal B - Addition
   Proposal C - Extension
   

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6. Identify the key fields
   Map them to JATS
   Propose sensible additions to JATS where needed
   Set out JATS usage that make data links machine readable
   

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7. Identify the key fields
   

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9. 31
   data description attributes
   

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10. 53
    groups providing guidance
    

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11. name
    Publication/Release Date /Year
    Title/Name of the Dataset
    Version/Edition
    Resource Type
    Persistent Global Identifier/ Locator (DOI/URL)
    Publisher/Distributor/ Repository/ Data Center /Archive
    Location of publisher/distributor
    Access Date(s) and Time
    Additional URI/Location /bridge service
    Secondary distributor/ other Institutional Role
    

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12. Map them to JATS
    

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13. bit.ly/data2jatsv1
    

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14. Set out JATS usage that make data links machine readable
    

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15. !
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16. !
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17. Propose sensible additions to JATS where needed
    

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18. !
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    ext-link extended to take: @issuing-agency=“pdb”!
    pub-id extended to take: @xlink!
    name extended to take: @id (of some kind)!
    !
    

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19. Questions
    Are there any serious objections to adopting specific-use=“data”
    and publication-type=“data”
    Is it possible to identify when to use these tags within a typesetting
    workflow?
    Would this group make use of the proposed additions, in time?
    Do we need to provide more machinery later to support more
    extensible data citation?
    

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20. Conclusions
    Most of the use cases for data citation can be implemented today
    JATS documentation can be updated very soon to reflect these
    cases
    Proposed additions could be trialled with reasonable ease
    The power to solve this issue lies with us - let’s do it!
    

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21. Actions
    Sign off on the proposed mapping
    Sign off on the proposed additions
    Generate best practice examples
    Publish documentation on JATS docs
    Implement in our editorial processes
    Relax with the warm glow of a job well done
    get sign off on the data spreadsheet of ALL THE THINGS
    Submit proposals to the NISO site
    

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