Medicine, National Taiwan University Slides by Liang Bo Wang High Performance Pipelines for NGS Data Analysis Home Support Info Guide << back to upload Sequence alignment : bwa-0.6.2-mt Variant detection : GenomeAnalysisTKLite-2.3-9 Others : picard-tools-1.74 samtools-0.1.18 IGVTools-2.1.24 Known indel : dbsnp137 Reference sequence : human_g1k_v37 Your task ID : eaeabdab-0bb5-42ed-9ee9-dd3d4a58a5e2 Tools used in this analysis References used in this analysis View No94_ACAGTG Results Reference sequence : human_g1k_v37 Step 1: Launch IGV in JAVA First time IGV user please visit IGV site for details with 750MB RAM with 1.2GB RAM with 2GB RAM with 10GB RAM Step 2: Load Data in IGV NOTE: Before clicking the following buttons, make sure genome "Human (1kg, b37+decoy)" was selected in the dropdown list on the top left corner of IGV window. If that option is not available, click "more..." in that list and select "Human (1kg, b37+decoy)" to add it to the list. View variants View alignment result Variants (12KB, VCF Format) Alignment result (8.0KB, BAM Format) Both (20KB) Copyright © 2013 National Center for Genome Medicine, Academia Sinica, Taiwan View No94_ACAGTG Results Download No94_ACAGTG Results