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Avatar for Cynthia SC

Cynthia SC

cyntsc
1 Stars

I am Staff Scientist, interested in transcriptomics and multimome approaches for human and plant research.
I handle a bunch of different kind of tools to process omics and some useful programming languages such as R and Python, both in linux environments.

Skills

Decks

Multiome: Single-nucleus multiomic profiling identifies cis-regulatory mechanisms in Alzheimer’s disease (AD)
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4
Chromatin Accessibility Downstream Analysis for High-Confidence Peaks
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9
Overview of Chromatin Accessibility Analysis “Strategies and Tools”
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17
Poster#2: Integrative Single-Cell and Epigenomic Profiling with Spatial Transcriptomics to identify Cell Types and cis-Regulatory Elements in the Human Habenula
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53
Poster#1: Integrative Single-Cell and Epigenomic Profiling with Spatial Transcriptomics to identify Cell Types and cis-Regulatory Elements in the Human Habenula
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13
An overview of the CellRanger-ARC Pipeline Analysis
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17
Clustering methods in multiome scRNA-seq and scATAC-seq
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54
ArchR software package for integrative single-cell chromatin accessibility analysis
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45
Multi-omic profiling of the developing human cerebral cortex at the single-cell level
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29
A comparative atlas of single-cell chromatin accessibility in the human brain
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30
GLM-PCA overview
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54
Integrated single cell and unsupervised spatial transcriptomic analysis defines molecular anatomy of the DLFPC
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36
Integrated single cell and spatial transcriptomic analysis defines molecular anatomy of the human DLPFC
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64
R for beginners from zero
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29

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