Upgrade to Pro — share decks privately, control downloads, hide ads and more …

Publishing bird tracking data: Movebank, Zenodo...

Avatar for Peter Desmet Peter Desmet
January 28, 2020
Science
240
0

Publishing bird tracking data: Movebank, Zenodo & GBIF

Talk at the Next Generation Animal Tracking meeting in Antwerp, Belgium - January 28, 2020.

Avatar for Peter Desmet

Peter Desmet

January 28, 2020

More Decks by Peter Desmet

See All by Peter Desmet
How a camera trap data standard enabled an ecosystem of interoperable tools
Avatar for Peter Desmet peterdesmet
0
95
Introducing Wild Moves and Wild Album
Avatar for Peter Desmet peterdesmet
0
58
Frictionless Data 101: How to document and validate datasets or create community standards with the Data Package standard
Avatar for Peter Desmet peterdesmet
0
96
How we plan to publish 1,000 bio-logging datasets to GBIF and OBIS
Avatar for Peter Desmet peterdesmet
0
120
Global Biodiversity Information Facility (GBIF): Supporting policy through data
Avatar for Peter Desmet peterdesmet
0
170
How we developed a data exchange format: Lessons learned from Camtrap DP
Avatar for Peter Desmet peterdesmet
1
420
B-Cubed: Leveraging analysis-ready biodiversity datasets and cloud computing for timely and actionable biodiversity monitoring
Avatar for Peter Desmet peterdesmet
0
410
MOVE2GBIF: GPS-zendergegevens van dieren mobiliseren naar Movebank en GBIF
Avatar for Peter Desmet peterdesmet
0
270
Introduction to Camtrap DP: A frictionless data exchange format for camera trapping data
Avatar for Peter Desmet peterdesmet
1
810

Other Decks in Science

See All in Science
人生を変えた一冊「独学大全」のはなし / Self-study ENCYCLOPEDIA: The Book Which Change My Life #独学大全 #EM推し本
Avatar for Shu OGAWARA expajp
0
180
(CVPR2026) Back to Basics: Let Denoising Generative Models Denoise
Avatar for Shumpei Takezaki shumpei777
0
220
生成AI・プレプリント時代における 研究成果公開の再設計 ― トップカンファレンス文化はどこへ向かうのか / Redesigning the Dissemination of Research Outputs in the Age of Generative AI and Preprints — Where Is the Top-Conference Culture Heading?
Avatar for Kiyota Yoji, Ph.D. ykiyota
0
29k
Cross-Media Technologies, Information Science and Human-Information Interaction
Avatar for Beat Signer signer
PRO
3
32k
機械学習 - DBSCAN
Avatar for Y. Yamamoto trycycle
PRO
0
1.9k
データベース06: SQL (3/3) 副問い合わせ
Avatar for Y. Yamamoto trycycle
PRO
1
1.1k
医療 LLM ベンチマークの現在地：多面的評価 と日本ローカライズ
Avatar for Hiroshi Y (RabotniKuma) analokmaus
1
600
(2025) Balade en cyclotomie
Avatar for Roger Mansuy mansuy
0
650
生成AIと司法書士の未来.pdf
Avatar for Y-h. Taguchi tagtag
PRO
0
140
フィードフォワードニューラルネットワークを用いた記号入出力制御系に対する制御器設計 / Controller Design for Augmented Systems with Symbolic Inputs and Outputs Using Feedforward Neural Network
Avatar for konakalab konakalab
0
160
「遂行理論の未来」（松島斉教授最終講義記念セッションの発表資料）
Avatar for Shunya Noda shunyanoda
0
940
HajimetenoLT vol.17
Avatar for hashimoto-kei hashimoto_kei
1
250

Featured

See All Featured
RailsConf & Balkan Ruby 2019: The Past, Present, and Future of Rails at GitHub
Avatar for Eileen M. Uchitelle eileencodes
141
35k
Marketing Yourself as an Engineer | Alaka | Gurzu
Avatar for Gurzu gurzu
0
260
What’s in a name? Adding method to the madness
Avatar for The Alliance productmarketing
PRO
24
4.1k
What's in a price? How to price your products and services
Avatar for Michael Herold michaelherold
247
13k
The Power of CSS Pseudo Elements
Avatar for Geoffrey Crofte geoffreycrofte
82
6.5k
HU Berlin: Industrial-Strength Natural Language Processing with spaCy and Prodigy
Avatar for Ines Montani inesmontani
PRO
0
550
Ecommerce SEO: The Keys for Success Now & Beyond - #SERPConf2024
Avatar for Aleyda Solis aleyda
1
2.1k
Connecting the Dots Between Site Speed, User Experience & Your Business [WebExpo 2025]
Avatar for Tammy Everts tammyeverts
11
970
Neural Spatial Audio Processing for Sound Field Analysis and Control
Avatar for NII S. Koyama's Lab skoyamalab
0
380
Jamie Indigo - Trashchat’s Guide to Black Boxes: Technical SEO Tactics for LLMs
Avatar for Tech SEO Connect techseoconnect
PRO
0
510
Discover your Explorer Soul
Avatar for Emna emna__ayadi
2
1.2k
Understanding Cognitive Biases in Performance Measurement
Avatar for Philip Tellis bluesmoon
32
3k

Transcript

  1. 28 January 2020, Antwerp Peter Desmet Publishing bird tracking data

    Movebank, Zenodo & GBIF

  2. Hi!

  3. Publishing to Movebank

  4. Manage data in UvA-BiTS

  5. Access data from UvA-BiTS

  6. Workflow Our database Custom format Our research group

  7. Workflow Our database Movebank Custom format Movebank attributes Our research

    group Movement ecology community

  8. Movebank.org

  9. Create a study on Movebank

  10. Upload data to Movebank

  11. Movebank attribute dictionary

  12. Transform data with SQL github.com/inbo/bird-tracking

  13. Extract data using R

  14. Tracking data in Movebank format

  15. Upload data to Movebank

  16. Data on Movebank

  17. Download from Movebank

  18. Interact with Movebank

  19. Manage data on Movebank

  20. Update data on Movebank

  21. Archiving data

  22. Workflow Our database Movebank Zenodo Custom format Movebank attributes Movebank

    attributes Our research group Movement ecology community Citable archive

  23. Movebank repository

  24. Zenodo https://doi.org/10.5281/zenodo.3540799

  25. Zenodo

  26. GBIF

  27. Global Biodiversity Information Facility (GBIF)

  28. Interoperable data

  29. Dataset on GBIF https://doi.org/10.15468/02omly

  30. Movebank to GBIF

  31. Workflow Our database Movebank Zenodo GBIF Custom format Movebank attributes

    Movebank attributes Darwin Core Our research group Movement ecology community Citable archive Biodiversity research community

  32. Thank you! Peter Desmet (2020) Publishing bird tracking data: Movebank,

    Zenodo & GBIF. Presentation. http://bit.ly/publishing-bird-tracking @oscibio Open science lab for biodiversity oscibio.inbo.be @peterdesmet