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Applying Bayesian Phylogenetic Methods to the Stemmatics of the Divine Comedy

Tiago Tresoldi
December 05, 2019

Applying Bayesian Phylogenetic Methods to the Stemmatics of the Divine Comedy

Presentation at the MPI-SHH WIP, December 2019

Tiago Tresoldi

December 05, 2019
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  1. Applying Bayesian Phylogenetic
    Methods to the Stemmatics of the
    Divine Comedy
    Tiago Tresoldi
    CALC/DLCE/MPI-SHH
    Jena, 2019-12-05

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  2. Stemmatics
    ● "Copies introduce changes"
    ● Developed along with religious and legal
    exegesis (e.g. "witnesses")
    ● Mutation traditionally seen as bad
    ○ "truth" of the archetype
    ○ "changes" are "errors" to be removed
    ○ "purity" and "contamination"
    ● Scientific discipline developed in the same
    cultural framework of evolutionary biology
    and historical linguistics
    ○ Karl Lachmann (1793-1851)
    ○ Joseph Bédier (1864-1938)
    ● Adoption of phylogenetics has been slow
    ○ "New stemmatics" (Bordalejo 2006; Robinson 2016)
    ○ "éloge de la variante" (Cerquiglini 1989) First actual stemma (Schlyter and Collins, 1827)

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  3. Learn stemmatics in one minute!
    Scheme of descent of the manuscripts of Pseudo-Apuleius' Herbarius by Henry E. Sigerist (1927) (Source: "Textual Criticism", Wikipedia)

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  4. Text in evolution
    ● Easy to find analogies with
    biology and linguistics (e.g.
    admixture)
    ● Copying manuscripts is hard
    ○ Copyists didn't even necessarily
    understand what they were
    writing!
    ● "Agency" of changes and of
    reconstructions
    ● Manuscripts are not static
    ● Changes are not necessarily
    independent
    ● Hard polytomies are real,
    common and expected "Christine de Pizan in her study" in Cent Ballades. British Library,
    Ms. Harley 4431, f° 4.

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  5. Divine Comedy, manuscript Triv Divine Comedy, manuscript Ash

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  6. Notes, glosses and corrections by Pietro Alighieri (c. 1350)

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  7. Divine Comedy
    ● One of the most successful medieval
    works
    ○ More than 600 complete manuscripts
    ○ Canterbury Tales at 80 (inc. incomplete ones)
    ● Written between 1306-1321, circulating
    before conclusion
    ● Read and copied by speakers of different
    varieties
    ● "Tradition" characterized by intentional
    "contamination"
    ○ The case of Boccaccio ("divina")
    ● "Errors" already in the oldest dated
    manuscript (Landiano, 1336)

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  8. Critical tradition
    ● First scientific approach by Barbi (1891)
    ○ 400 loci critici (~ SNPs vs. whole sequencing)
    ● Casella (1921) proposed the first tree(s)
    ● Petrocchi (1965) published the most important edition
    ○ Excludes everything that might have been influenced by Boccaccio
    ○ Stemmatic, but also practical reasons
    ● Sanguineti (2001) proposed a new tree
    ○ Collatio of the full text, but only seven manuscripts
    ○ Rb and Urb have a new placement
    ● Shaw (2011) contrasts Sanguineti with a digital edition and
    phylogenetic analyses

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  9. Casella's tree(s)

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  10. Critical tradition
    ● First scientific approach by Barbi (1891)
    ○ 400 loci critici (~ SNPs vs. whole sequencing)
    ● Casella (1921) proposed the first tree(s)
    ● Petrocchi (1965) published the most important edition
    ○ Excludes everything that might have been influenced by Boccaccio
    ○ Stemmatic, but also practical reasons
    ● Sanguineti (2001) proposed a new tree
    ○ Collatio of the full text, but only seven manuscripts
    ○ Rb and Urb have a new placement
    ● Shaw (2011) contrasts Sanguineti with a digital edition and
    phylogenetic analyses

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  11. View Slide

  12. Critical tradition
    ● First scientific approach by Barbi (1891)
    ○ 400 loci critici (~ SNPs vs. whole sequencing)
    ● Casella (1921) proposed the first tree(s)
    ● Petrocchi (1965) published the most important edition
    ○ Excludes everything that might have been influenced by Boccaccio
    ○ Stemmatic, but also practical reasons
    ● Sanguineti (2001) proposed a new tree
    ○ Collatio of the full text, but only seven manuscripts
    ○ Rb and Urb have a new placement
    ● Shaw (2011) contrasts Sanguineti with a digital edition and
    phylogenetic analyses

    View Slide

  13. View Slide

  14. Critical tradition
    ● First scientific approach by Barbi (1891)
    ○ 400 loci critici (~ SNPs vs. whole sequencing)
    ● Casella (1921) proposed the first tree(s)
    ● Petrocchi (1965) published the most important edition
    ○ Excludes everything that might have been influenced by Boccaccio
    ○ Stemmatic, but also practical reasons
    ● Sanguineti (2001) proposed a new tree
    ○ Collatio of the full text, but only seven manuscripts
    ○ Rb and Urb have a new placement
    ● Shaw (2011) contrasts Sanguineti with a digital edition and
    phylogenetic analyses

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  15. View Slide

  16. Many questions
    ● Can we reproduce Petrocchi's tree
    with Bayesian analysis?
    ○ Can we support it by using the entire text
    instead of the 400 loci?
    ● Can we support Sanguineti's tree,
    especially the relationship between
    Urb and Rb?
    ● Can we reproduce Shaw's findings
    with Bayesian analysis?
    ● Is there evidence for an independent
    tradition for each cantica?
    ● Can we start building a pipeline for:
    ○ Incorporating more manuscripts of the
    Divine Comedy?
    ○ Studying other works?
    Papyrus 52 (oldest fragmentary manuscript of the New
    Testament)

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  17. Data and analysis
    ● Collecting and expanding data from Shaw's edition
    ● 34 taxa
    ○ 6 (+1) witnesses
    ○ layers of correction independently coded
    ○ 3 critical editions (Petrocchi, Leonardi, Sanguineti)
    ● 94,782 characters (34,417 sites, 1,487 patterns)
    ● Most characters with either a single state or two states
    ○ Not considering orthography
    ○ However, in some cases over 10 states
    ● Initial exploratory analyses with Neighbor-nets; Bayesian with
    BEAST2
    ○ Only seven main manuscripts / all witnesses
    ○ The entire text / each cantica independently
    ○ 400 loci / the entire text

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  18. Example of the raw source data provided by Shaw (2011).

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  19. NEXUS

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  21. Covarion, birth-death, strict clock, global variation, MCMC length 25M, all taxa

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  22. Covarion, birth-death, strict clock, global variation, MCMC length 25M, selected taxa

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  23. Covarion, birth-death, relaxed clock, rate variation, MCMC length 500k, selected taxa

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  24. ASR is hard(er)
    ● In the first canto (NEXUS character I_01_048_7), the author describes a
    terrifying she-wolf walking towards him
    a. parea che l'aere ne temesse ("as if the air afraid of it [=the she-wolf]")
    b. parea che l'aere ne tremesse ("as if the air was shaken by it [=the
    walking]")
    ● Experts' consensus is that it is a "facilitation" of the original, employing
    the Latinism tremere (Italian has tremare)
    ○ Common principle of lectio difficilior potior (the most difficult state is the strongest)
    ○ Used by the author elsewhere (e.g. Letter VI, 24, and Rime IV.1-2, where the air is
    "shaken by a person walking")
    ○ Literary critics agree that it fits the tone much better

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  25. Higher goals
    ● Problem of the Synoptic
    Gospels
    ● Evolution of religious texts in
    light of history. For example, in
    earlier manuscripts:
    ○ Mark ends with the death of Jesus
    (Mark 16:9-20 not found)
    ○ Luke 23:34 ("Forgive them, for
    they know not what they do") is
    missing
    ○ Paul's injunction to women to be
    "silent" and "subordinate" (1 Cor
    14:34-35) is missing

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  26. References
    ALAGHERII, Dantis (2001). Comedìa. Edited by Federico Sanguineti. Firenze: Edizioni del Galluzzo.
    ALIGHIERI, Dante (1994). La Commedia Secondo L’antica Vulgata: Introduzione. Edited by Giorgio Petrocchi. Opere di Dante Alighieri v. 1. Firenze: Le
    Lettere.
    BORDALEJO, Barbara (2006). Modern Genetic Methods: the New Stemmatics. http://www.textualscholarship.org/stemmatics/index.html. Accessed on
    December 4, 2019.
    CERQUIGLINI, Bernard (1989). Éloge de la variante: histoire critique de la philologie. Aux Travaux. Paris: Éditions du Seuil.
    HOWE, Christopher J.; CONNOLLY, Ruth; WINDRAM, Heather F. (2012). “Responding to Criticisms of Phylogenetic Methods in Stemmatology.” Studies in
    English Literature 1500-1900 52 (1): 51 – 67.
    LEONARDI, Anna M. C. (1991). “Introduzione.” In La Divina Commedia. Milano: Arnoldo Mondadori Editore.
    MACÉ, Caroline; BARET, Philippe V. (2006). “Why Phylogenetic Methods Work: the Theory of Evolution and Textual Criticism.” Linguistica Computazionale
    24: 89 – 108.
    ROBINSON, Peter (2016). “Four Rules for the Application of Phylogenetics in the Analysis of Textual Traditions.” Digital Scholarship in the Humanities 31
    (3): 637 – 651.
    SHAW, Prue (2011). Commedia: a Digital Edition. Birmingham: Scholarly Digital Editions.
    TROVATO, Paolo; TONELLO, Elisabetta (2016). “Premessa ai saggi di edizione e di commento di Inferno XXXIV.” Commedia (2). Padova:
    Libreriauniversitaria.it.

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  27. Thank you!
    Main findings so far:
    ● Phylogenetic analysis supports Shaw (and Petrocchi) more than
    Sanguineti
    ○ But it is not so clear-cut
    ● No support for an independent tradition of each cantica
    ● Loci critici seem to perform better than random selections of
    equivalent size
    ● Evolutionary models are not suitable out-of-the-box
    ○ Date-calibration can worsen the results
    ● Probabilities of substitution might depend on character as well as
    value

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