A brief overview of the research I have conducted as part of my PhD at on scalable visual analytics systems for exploring and analyzing patterns in epigenomic data.
Multiscale VisualPattern Explorationin GenomicsFritz Lekschas, Ph.D. CandidateHarvard UniversityAdvisor: Hanspeter PfisterCore Collaborators: Nils Gehlenborg, Benjamin Bach, Peter Kerpedjiev, Nezar AbdennurDavis et al. (2018) The Encyclopedia of DNA elements (ENCODE): data portal update.
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Hi-CBrowse Compare SearchChIP-seqDNase-seq
HiGlassKerpedjiev, Abdennur, Lekschas, ..., Pfister, Mirny, Park, & Gehlenborg. Genome Biology, 2018.
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Scalable Visual Analytics Systemsfor Exploring Biomedical DataData VisualizationHuman-Centered MLUser-Driven DesignHuman-Data Interaction