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Self-Intro

Fritz Lekschas
November 13, 2020
Science
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44

 Self-Intro

A brief overview of the research I have conducted as part of my PhD at on scalable visual analytics systems for exploring and analyzing patterns in epigenomic data.

Fritz Lekschas

November 13, 2020
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Transcript

  1. Multiscale Visual
    Pattern Exploration
    in Genomics
    Fritz Lekschas, Ph.D. Candidate
    Harvard University
    Advisor:
    

    Hanspeter Pfister
    Core Collaborators:
    

    Nils Gehlenborg, Benjamin Bach,

    Peter Kerpedjiev, Nezar Abdennur
    Davis et al. (2018) The Encyclopedia of DNA elements (ENCODE): data portal update.

    View Slide

  2. Hi-C
    Browse Compare Search
    ChIP-seq
    DNase-seq

    View Slide

  3. HiGlass
    Kerpedjiev, Abdennur, Lekschas, ..., Pfister, Mirny, Park, & Gehlenborg. Genome Biology, 2018.

    View Slide

  4. HiGlass
    Kerpedjiev, Abdennur, Lekschas, ..., Pfister, Mirny, Park, & Gehlenborg. Genome Biology, 2018.

    View Slide

  5. HiGlass
    Kerpedjiev, Abdennur, Lekschas, ..., Pfister, Mirny, Park, & Gehlenborg. Genome Biology, 2018.

    View Slide

  6. HiGlass
    Kerpedjiev, Abdennur, Lekschas, ..., Pfister, Mirny, Park, & Gehlenborg. Genome Biology, 2018.

    View Slide

  7. HiPiler

    View Slide

  8. HiPiler

    View Slide

  9. HiPiler

    View Slide

  10. HiPiler

    View Slide

  11. HiPiler

    View Slide

  12. Peax

    View Slide

  13. Peax

    View Slide

  14. Peax

    View Slide

  15. Peax

    View Slide

  16. Peax

    View Slide

  17. Scalable Visual Analytics Systems
    for Exploring Biomedical Data
    Data Visualization
    Human-Centered ML
    User-Driven Design
    Human-Data Interaction

    View Slide