Upgrade to Pro — share decks privately, control downloads, hide ads and more …

Ecologist must use git

Sponsored · Your Podcast. Everywhere. Effortlessly. Share. Educate. Inspire. Entertain. You do you. We'll handle the rest.
Avatar for Uryu Shinya Uryu Shinya
January 24, 2015

Ecologist must use git

2015年1月24日(土曜日)に東京大学で行われた日本生態学会関東地区会公開シンポジウム ライトニングトークで発表した内容

GitHub repository -> https://github.com/uribo/talk_150124elt

Avatar for Uryu Shinya

Uryu Shinya

January 24, 2015
Tweet

More Decks by Uryu Shinya

Other Decks in Research

Transcript

  1. GitHub ׆༻ࣄྫ: R ύοέʔδ ։ൃɺ഑෍͸ CRAN GitHub ͕ओྲྀʹ ྫ) taxize

    ύοέʔδ (https://github.com/ropensci/taxize) devtools::install_github("taxize", "ropensci")
  2. GitHub ׆༻ࣄྫ: BADD https://github.com/dfalster/baad  a Biomass And Allometry Database

    for woody plants  σʔλ͓Αͼ࢖༻ͨ͠ R ίʔυΛެ։  Ecology ʹ౤ߘதͱͷ͜ͱ
  3. Reproducible Research ʹର͢Δػӡ Ram, K. (2013). Git can facilitate greater

    reproducibility and increased transparency in science. Source Code for Biology and Medicine Peng, R. D. (2011). Science Loman, N., & Watson, M. (2013). Nature Biotechnology http://www.nature.com/news/toolbox