Upgrade to Pro
— share decks privately, control downloads, hide ads and more …
Speaker Deck
Features
Speaker Deck
PRO
Sign in
Sign up for free
Search
Search
Galaxy Community VM による NGSデータ解析
Search
Tazro Inutano Ohta
June 05, 2015
Research
1
160
Galaxy Community VM による NGSデータ解析
第13回 がんとハイポキシア研究会
http://www.cancer-hypoxia.org/13th_conference.htm
Tazro Inutano Ohta
June 05, 2015
Tweet
Share
More Decks by Tazro Inutano Ohta
See All by Tazro Inutano Ohta
Yevis: System to support building a workflow registry with automated quality control
inutano
0
120
Standardization of biological sample information database
inutano
0
73
Describe data analysis workflow with workflow languages
inutano
5
5.5k
Container virtualization technologies and workflow languages improve portability and reproducibility of data analysis environment
inutano
3
340
次世代シーケンサーによるメタゲノム解析:桜の花びらに付着した環境DNAを解析する
inutano
0
100
Workflows that run everywhere and where to run them
inutano
0
160
The Sequence Read Archive search system to make use of public high-throughput sequencing data
inutano
0
290
Improve portability of bioinformatics software across HPC and cloud infrastructures
inutano
1
110
Container, Cloud, and HPC
inutano
0
170
Other Decks in Research
See All in Research
Minimax and Bayes Optimal Best-arm Identification: Adaptive Experimental Design for Treatment Choice
masakat0
0
180
不確実性下における目的と手段の統合的探索に向けた連続腕バンディットの応用 / iot70_gp_rff_mab
monochromegane
2
190
Generative Models 2025
takahashihiroshi
25
14k
情報技術の社会実装に向けた応用と課題:ニュースメディアの事例から / appmech-jsce 2025
upura
0
200
言語モデルの地図:確率分布と情報幾何による類似性の可視化
shimosan
6
1.7k
J-RAGBench: 日本語RAGにおける Generator評価ベンチマークの構築
koki_itai
0
680
[CV勉強会@関東 CVPR2025] VLM自動運転model S4-Driver
shinkyoto
2
520
SSII2025 [TS3] 医工連携における画像情報学研究
ssii
PRO
3
1.3k
Creation and environmental applications of 15-year daily inundation and vegetation maps for Siberia by integrating satellite and meteorological datasets
satai
3
390
2021年度-基盤研究B-研究計画調書
trycycle
PRO
0
340
SNLP2025:Can Language Models Reason about Individualistic Human Values and Preferences?
yukizenimoto
0
180
日本語新聞記事を用いた大規模言語モデルの暗記定量化 / LLMC2025
upura
0
240
Featured
See All Featured
Being A Developer After 40
akosma
91
590k
Why You Should Never Use an ORM
jnunemaker
PRO
59
9.6k
Responsive Adventures: Dirty Tricks From The Dark Corners of Front-End
smashingmag
252
21k
Building Adaptive Systems
keathley
43
2.8k
YesSQL, Process and Tooling at Scale
rocio
173
14k
Dealing with People You Can't Stand - Big Design 2015
cassininazir
367
27k
We Have a Design System, Now What?
morganepeng
53
7.8k
Balancing Empowerment & Direction
lara
4
680
Why Our Code Smells
bkeepers
PRO
339
57k
4 Signs Your Business is Dying
shpigford
185
22k
How to train your dragon (web standard)
notwaldorf
96
6.3k
Visualizing Your Data: Incorporating Mongo into Loggly Infrastructure
mongodb
48
9.7k
Transcript
Pitagora-Galaxy Project 2015 (BMBYZ$PNNVOJUZ7.ʹΑΔ /(4σʔλղੳ େాୡ ࢁதྒྷଠ ใɾγεςϜݚڀػߏϥΠϑαΠΤϯε౷߹σʔλϕʔεηϯλʔ ౦ژେֶઌՊֶٕज़ݚڀηϯλʔ
͕ΜͱϋΠϙΩγΞݚڀձ
Pitagora-Galaxy Project 2015 (BMBYZͱʁ (BMBYZɺແঈͰར༻Ͱ͖Δ౷߹σʔλղੳڥͰ͢ɻެ։͞Ε͍ͯΔιϑτΣΞ πʔϧ ΛΈ߹ΘͨղੳύΠϓϥΠϯͷߏஙɺ࣮ߦɺ࠶࣮ߦ݁Ռͷڞ༗͕؆୯ʹ ߦ͑ΔͨΊɺ/(4σʔλղੳʹ͘ར༻͞Ε͖࣮͕ͯͨ͋Γ·͢ 'JH
'JH (BMBYZͷΠϯλʔϑΣʔε 'JH (BMBYZ্ͰͷϫʔΫϑϩʔ
Pitagora-Galaxy Project 2015 'JH XXXQJUBHPSBHBMBYZPSH 'JH ϐλΰϥɾΪϟϥΫγʔɾϓϩδΣΫτ (BMBYZ$PNNVOJUZ7. (BMBYZ$PNNVOJUZ+BQBO 1JUBHPSB(BMBYZ1SPKFDU
ɺ(BMBYZʹ͍ͭͯͷใڞ ༗ͷͨΊͷΣϒαΠτ XXXQJUBHPSBHBMBYZPSH Λ։ઃ͢Δͱڞʹɺ(BMBYZͱ ͦͷ্Ͱಈ࡞͢ΔπʔϧϫʔΫϑϩʔΛઃఆࡁΈͷԾڥΛ͍ͯ͠·͢ɻҎ Լͷͭͷํ๏Ͱ͙͢ʹղੳϫʔΫϑϩʔΛ࣮ߦͰ͖·͢ɻ 'JH ࣗͷ1$αʔόʔͰ͑ΔԾڥ ؆୯ͳղੳ͕Ͱ͖Δެ։ςετ༻αΠτ ΫϥυͰىಈͰ͖ΔϚγϯΠϝʔδ
Pitagora-Galaxy Project 2015 ಠࣗͷ֦ுػೳ 3FGFSFODF%PXOMPBE 'JH ɺϦϑΝϨϯεσʔλ ྫ͑ɺ'"45"ήϊϜϑΝΠϧ #8"ͷΠϯσοΫεϑΝΠϧ Λ؆୯ʹμϯϩʔυͰ͖ΔπʔϧͰ͢ɻ-PDBM'JMF
#SPXTFS 'JH ɺ(BMBYZ্ͰγʔέϯεσʔλϑΝΠϧΛཧͰ͖ΔπʔϧͰ͢ɻ֤ݚ ڀػؔͷطଘͷγʔέϯεσʔλΛݕࡧͯ͠(BMBYZʹΠϯϙʔτ͢Δ͜ͱ͕ग़དྷ·͢ɻ 'JH 3FGFSFODF%PXOMPBE 'JH -PDBM'JMF#SPXTFS
Pitagora-Galaxy Project 2015 ৴པͰ͖ΔϫʔΫϑϩʔ (BMBYZ$PNNVOJUZ+BQBOʹ༷ʑͳେֶݚڀॴͷ(BMBYZϢʔβ͕ू·ΓɺͦΕͧ ΕͷݚڀࣨͰߏஙɾར༻͍ͯ͠ΔϫʔΫϑϩʔΛڞ༗͍ͯ͠·͢ɻͦΕͧΕͷϫʔΫ ϑϩʔʹ͍ͭͯͷৄࡉXJLJ XJLJQJUBHPSBHBMBYZPSHXJLJ ʹ·ͱΊΒΕ͍ͯ·͢ɻ $PNNVOJUZ7.Λར༻͢Εɺ֤ݚڀࣨͰΘΕ࣮ͨͷ͋ΔϫʔΫϑϩʔΛɺ͙͢
ʹ࣮ߦ͢Δ͜ͱ͕Ͱ͖·͢ 'JH ɻ 'JH ࢈૯ݚʹΑΔ#JTVMpUF4FRͷղੳϫʔΫϑϩʔ 'JH ཧݚʹΑΔ3/"4FRͷղੳϫʔΫϑϩʔ
Pitagora-Galaxy Project 2015 কདྷల ϐλΰϥΪϟϥΫγʔϓϩδΣΫτͰ ɺ%PDLFSίϯςφΠϝʔδͷ࡞ ʹऔΓΜͰ͍·͢ɻ%PDLFSʹΑ Γɺ7.ΑΓߴ͍ύϑΥʔϚϯεͱɺ %PDLFSpMFʹΑΔ*OGSBTUSVDUVSFBT $PEFͷ࣮ݱʹΑΓɺσʔλղੳͷ࠶
ݱੑΛ͞Βʹ্͢Δ͜ͱ͕Ͱ͖·͢ɻ কདྷతʹɺϢʔβχʔζʹ߹Θͤͨ ༷ʑͳܗͰͷԾڥͷΛߦͬͯ ͍͖·͢ɻ