Upgrade to PRO for Only $50/Year—Limited-Time Offer! 🔥

Galaxy Community VM による NGSデータ解析

Avatar for Tazro Inutano Ohta Tazro Inutano Ohta
June 05, 2015
Research
1
170

Galaxy Community VM による NGSデータ解析

第13回 がんとハイポキシア研究会 http://www.cancer-hypoxia.org/13th_conference.htm

Avatar for Tazro Inutano Ohta

Tazro Inutano Ohta

June 05, 2015
Tweet

More Decks by Tazro Inutano Ohta

See All by Tazro Inutano Ohta
Yevis: System to support building a workflow registry with automated quality control
Avatar for Tazro Inutano Ohta inutano
0
130
Standardization of biological sample information database
Avatar for Tazro Inutano Ohta inutano
0
80
Describe data analysis workflow with workflow languages
Avatar for Tazro Inutano Ohta inutano
5
5.7k
Container virtualization technologies and workflow languages improve portability and reproducibility of data analysis environment
Avatar for Tazro Inutano Ohta inutano
3
350
次世代シーケンサーによるメタゲノム解析：桜の花びらに付着した環境DNAを解析する
Avatar for Tazro Inutano Ohta inutano
0
110
Workflows that run everywhere and where to run them
Avatar for Tazro Inutano Ohta inutano
0
170
The Sequence Read Archive search system to make use of public high-throughput sequencing data
Avatar for Tazro Inutano Ohta inutano
0
300
Improve portability of bioinformatics software across HPC and cloud infrastructures
Avatar for Tazro Inutano Ohta inutano
1
120
Container, Cloud, and HPC
Avatar for Tazro Inutano Ohta inutano
0
180

Other Decks in Research

See All in Research
[RSJ25] Enhancing VLA Performance in Understanding and Executing Free-form Instructions via Visual Prompt-based Paraphrasing
Avatar for Semantic Machine Intelligence Lab., Keio Univ. keio_smilab
PRO
0
180
snlp2025_prevent_llm_spikes
Avatar for Sho Takase takase
0
420
情報技術の社会実装に向けた応用と課題：ニュースメディアの事例から / appmech-jsce 2025
Avatar for Shotaro Ishihara upura
0
280
超高速データサイエンス
Avatar for Yusuke Matsui matsui_528
1
320
LLM-Assisted Semantic Guidance for Sparsely Annotated Remote Sensing Object Detection
Avatar for SatAI.challenge satai
3
180
Unsupervised Domain Adaptation Architecture Search with Self-Training for Land Cover Mapping
Avatar for SatAI.challenge satai
3
410
論文読み会 SNLP2025 Learning Dynamics of LLM Finetuning. In: ICLR 2025
Avatar for S s_mizuki_nlp
0
350
国際論文を出そう！ICRA / IROS / RA-L への論文投稿の心構えとノウハウ / RSJ2025 Luncheon Seminar
Avatar for koide3 koide3
11
6.4k
[Devfest Incheon 2025] 모두를 위한 친절한 언어모델(LLM) 학습 가이드
Avatar for Beomi beomi
2
1.2k
病院向け生成AIプロダクト開発の実践と課題
Avatar for Takashi Nishibayashi hagino3000
0
460
EcoWikiRS: Learning Ecological Representation of Satellite Images from Weak Supervision with Species Observation and Wikipedia
Avatar for SatAI.challenge satai
3
460
Language Models Are Implicitly Continuous
Avatar for Sho Yokoi eumesy
PRO
0
360

Featured

See All Featured
Producing Creativity
Avatar for Steve Smith orderedlist
PRO
348
40k
Max Prin - Stacking Signals: How International SEO Comes Together (And Falls Apart)
Avatar for Tech SEO Connect techseoconnect
PRO
0
47
[RailsConf 2023 Opening Keynote] The Magic of Rails
Avatar for Eileen M. Uchitelle eileencodes
31
9.8k
Designing for Performance
Avatar for Lara Hogan lara
610
69k
The Organizational Zoo: Understanding Human Behavior Agility Through Metaphoric Constructive Conversations (based on the works of Arthur Shelley, Ph.D)
Avatar for Dr. Kim W Petersen kimpetersen
PRO
0
200
Testing 201, or: Great Expectations
Avatar for Joseph Mastey jmmastey
46
7.8k
Reality Check: Gamification 10 Years Later
Avatar for Sebastian Deterding codingconduct
0
1.9k
The Art of Programming - Codeland 2020
Avatar for Erika Heidi erikaheidi
56
14k
How to Align SEO within the Product Triangle To Get 
Buy-In & Support - #RIMC
Avatar for Aleyda Solis aleyda
1
1.3k
Avoiding the “Bad Training, Faster” Trap in the Age of AI
Avatar for Mike Taylor tmiket
0
34
Self-Hosted WebAssembly Runtime for Runtime-Neutral Checkpoint/Restore in Edge–Cloud Continuum
Avatar for Yuki Nakata chikuwait chikuwait
0
28
Helping Users Find Their Own Way: Creating Modern Search Experiences
Avatar for Dan Newman danielanewman
31
3k

Transcript

  1. Pitagora-Galaxy Project 2015 (BMBYZ$PNNVOJUZ7.ʹΑΔ /(4σʔλղੳ େాୡ࿠ ࢁதྒྷଠ ৘ใɾγεςϜݚڀػߏϥΠϑαΠΤϯε౷߹σʔλϕʔεηϯλʔ  ౦ژେֶઌ୺Պֶٕज़ݚڀηϯλʔ

    ͕ΜͱϋΠϙΩγΞݚڀձ

  2. Pitagora-Galaxy Project 2015 (BMBYZͱ͸ʁ (BMBYZ͸ɺແঈͰར༻Ͱ͖Δ౷߹σʔλղੳ؀ڥͰ͢ɻެ։͞Ε͍ͯΔιϑτ΢ΣΞ πʔϧ Λ૊Έ߹ΘͨղੳύΠϓϥΠϯͷߏஙɺ࣮ߦɺ࠶࣮ߦ΍݁Ռͷڞ༗͕؆୯ʹ ߦ͑ΔͨΊɺ/(4σʔλղੳʹ޿͘ར༻͞Ε͖࣮ͯͨ੷͕͋Γ·͢ 'JH 

    'JH (BMBYZͷΠϯλʔϑΣʔε 'JH (BMBYZ্ͰͷϫʔΫϑϩʔ

  3. Pitagora-Galaxy Project 2015 'JH XXXQJUBHPSBHBMBYZPSH 'JH ϐλΰϥɾΪϟϥΫγʔɾϓϩδΣΫτ (BMBYZ$PNNVOJUZ7. (BMBYZ$PNNVOJUZ+BQBO 1JUBHPSB(BMBYZ1SPKFDU

    ͸ɺ(BMBYZʹ͍ͭͯͷ৘ใڞ ༗ͷͨΊͷ΢ΣϒαΠτ XXXQJUBHPSBHBMBYZPSH Λ։ઃ͢Δͱڞʹɺ(BMBYZͱ ͦͷ্Ͱಈ࡞͢Δπʔϧ΍ϫʔΫϑϩʔΛઃఆࡁΈͷԾ૝؀ڥΛ഑෍͍ͯ͠·͢ɻҎ Լͷͭͷํ๏Ͱ͙͢ʹղੳϫʔΫϑϩʔΛ࣮ߦͰ͖·͢ɻ 'JH    ࣗ෼ͷ1$΍αʔόʔͰ࢖͑ΔԾ૝؀ڥ  ؆୯ͳղੳ͕Ͱ͖Δެ։ςετ༻αΠτ  Ϋϥ΢υͰىಈͰ͖ΔϚγϯΠϝʔδ

  4. Pitagora-Galaxy Project 2015 ಠࣗͷ֦ுػೳ 3FGFSFODF%PXOMPBE 'JH ͸ɺϦϑΝϨϯεσʔλ ྫ͑͹ɺ'"45"ήϊϜϑΝΠϧ΍ #8"ͷΠϯσοΫεϑΝΠϧ Λ؆୯ʹμ΢ϯϩʔυͰ͖ΔπʔϧͰ͢ɻ-PDBM'JMF

    #SPXTFS 'JH ͸ɺ(BMBYZ্ͰγʔέϯεσʔλϑΝΠϧΛ؅ཧͰ͖ΔπʔϧͰ͢ɻ֤ݚ ڀػؔͷطଘͷγʔέϯεσʔλΛݕࡧͯ͠(BMBYZʹΠϯϙʔτ͢Δ͜ͱ͕ग़དྷ·͢ɻ 'JH 3FGFSFODF%PXOMPBE 'JH -PDBM'JMF#SPXTFS

  5. Pitagora-Galaxy Project 2015 ৴པͰ͖ΔϫʔΫϑϩʔ (BMBYZ$PNNVOJUZ+BQBOʹ͸༷ʑͳେֶ΍ݚڀॴͷ(BMBYZϢʔβ͕ू·ΓɺͦΕͧ ΕͷݚڀࣨͰߏஙɾར༻͍ͯ͠ΔϫʔΫϑϩʔΛڞ༗͍ͯ͠·͢ɻͦΕͧΕͷϫʔΫ ϑϩʔʹ͍ͭͯͷৄࡉ͸XJLJ XJLJQJUBHPSBHBMBYZPSHXJLJ ʹ·ͱΊΒΕ͍ͯ·͢ɻ $PNNVOJUZ7.Λར༻͢Ε͹ɺ֤ݚڀࣨͰ࢖ΘΕ࣮ͨ੷ͷ͋ΔϫʔΫϑϩʔΛɺ͙͢

    ʹ࣮ߦ͢Δ͜ͱ͕Ͱ͖·͢ 'JH  ɻ 'JH ࢈૯ݚʹΑΔ#JTVMpUF4FRͷղੳϫʔΫϑϩʔ 'JH ཧݚʹΑΔ3/"4FRͷղੳϫʔΫϑϩʔ

  6. Pitagora-Galaxy Project 2015 কདྷల๬ ϐλΰϥΪϟϥΫγʔϓϩδΣΫτͰ ͸ɺ%PDLFSίϯςφΠϝʔδͷ࡞੒ ʹ΋औΓ૊ΜͰ͍·͢ɻ%PDLFSʹΑ Γɺ7.ΑΓ΋ߴ͍ύϑΥʔϚϯεͱɺ %PDLFSpMFʹΑΔ*OGSBTUSVDUVSFBT $PEFͷ࣮ݱʹΑΓɺσʔλղੳͷ࠶

    ݱੑΛ͞Βʹ޲্͢Δ͜ͱ͕Ͱ͖·͢ɻ কདྷతʹ͸ɺϢʔβχʔζʹ߹Θͤͨ ༷ʑͳܗͰͷԾ૝؀ڥͷ഑෍Λߦͬͯ ͍͖·͢ɻ