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Galaxy Community VM による NGSデータ解析
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Tazro Inutano Ohta
June 05, 2015
Research
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Galaxy Community VM による NGSデータ解析
第13回 がんとハイポキシア研究会
http://www.cancer-hypoxia.org/13th_conference.htm
Tazro Inutano Ohta
June 05, 2015
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Transcript
Pitagora-Galaxy Project 2015 (BMBYZ$PNNVOJUZ7.ʹΑΔ /(4σʔλղੳ େాୡ ࢁதྒྷଠ ใɾγεςϜݚڀػߏϥΠϑαΠΤϯε౷߹σʔλϕʔεηϯλʔ ౦ژେֶઌՊֶٕज़ݚڀηϯλʔ
͕ΜͱϋΠϙΩγΞݚڀձ
Pitagora-Galaxy Project 2015 (BMBYZͱʁ (BMBYZɺແঈͰར༻Ͱ͖Δ౷߹σʔλղੳڥͰ͢ɻެ։͞Ε͍ͯΔιϑτΣΞ πʔϧ ΛΈ߹ΘͨղੳύΠϓϥΠϯͷߏஙɺ࣮ߦɺ࠶࣮ߦ݁Ռͷڞ༗͕؆୯ʹ ߦ͑ΔͨΊɺ/(4σʔλղੳʹ͘ར༻͞Ε͖࣮͕ͯͨ͋Γ·͢ 'JH
'JH (BMBYZͷΠϯλʔϑΣʔε 'JH (BMBYZ্ͰͷϫʔΫϑϩʔ
Pitagora-Galaxy Project 2015 'JH XXXQJUBHPSBHBMBYZPSH 'JH ϐλΰϥɾΪϟϥΫγʔɾϓϩδΣΫτ (BMBYZ$PNNVOJUZ7. (BMBYZ$PNNVOJUZ+BQBO 1JUBHPSB(BMBYZ1SPKFDU
ɺ(BMBYZʹ͍ͭͯͷใڞ ༗ͷͨΊͷΣϒαΠτ XXXQJUBHPSBHBMBYZPSH Λ։ઃ͢Δͱڞʹɺ(BMBYZͱ ͦͷ্Ͱಈ࡞͢ΔπʔϧϫʔΫϑϩʔΛઃఆࡁΈͷԾڥΛ͍ͯ͠·͢ɻҎ Լͷͭͷํ๏Ͱ͙͢ʹղੳϫʔΫϑϩʔΛ࣮ߦͰ͖·͢ɻ 'JH ࣗͷ1$αʔόʔͰ͑ΔԾڥ ؆୯ͳղੳ͕Ͱ͖Δެ։ςετ༻αΠτ ΫϥυͰىಈͰ͖ΔϚγϯΠϝʔδ
Pitagora-Galaxy Project 2015 ಠࣗͷ֦ுػೳ 3FGFSFODF%PXOMPBE 'JH ɺϦϑΝϨϯεσʔλ ྫ͑ɺ'"45"ήϊϜϑΝΠϧ #8"ͷΠϯσοΫεϑΝΠϧ Λ؆୯ʹμϯϩʔυͰ͖ΔπʔϧͰ͢ɻ-PDBM'JMF
#SPXTFS 'JH ɺ(BMBYZ্ͰγʔέϯεσʔλϑΝΠϧΛཧͰ͖ΔπʔϧͰ͢ɻ֤ݚ ڀػؔͷطଘͷγʔέϯεσʔλΛݕࡧͯ͠(BMBYZʹΠϯϙʔτ͢Δ͜ͱ͕ग़དྷ·͢ɻ 'JH 3FGFSFODF%PXOMPBE 'JH -PDBM'JMF#SPXTFS
Pitagora-Galaxy Project 2015 ৴པͰ͖ΔϫʔΫϑϩʔ (BMBYZ$PNNVOJUZ+BQBOʹ༷ʑͳେֶݚڀॴͷ(BMBYZϢʔβ͕ू·ΓɺͦΕͧ ΕͷݚڀࣨͰߏஙɾར༻͍ͯ͠ΔϫʔΫϑϩʔΛڞ༗͍ͯ͠·͢ɻͦΕͧΕͷϫʔΫ ϑϩʔʹ͍ͭͯͷৄࡉXJLJ XJLJQJUBHPSBHBMBYZPSHXJLJ ʹ·ͱΊΒΕ͍ͯ·͢ɻ $PNNVOJUZ7.Λར༻͢Εɺ֤ݚڀࣨͰΘΕ࣮ͨͷ͋ΔϫʔΫϑϩʔΛɺ͙͢
ʹ࣮ߦ͢Δ͜ͱ͕Ͱ͖·͢ 'JH ɻ 'JH ࢈૯ݚʹΑΔ#JTVMpUF4FRͷղੳϫʔΫϑϩʔ 'JH ཧݚʹΑΔ3/"4FRͷղੳϫʔΫϑϩʔ
Pitagora-Galaxy Project 2015 কདྷల ϐλΰϥΪϟϥΫγʔϓϩδΣΫτͰ ɺ%PDLFSίϯςφΠϝʔδͷ࡞ ʹऔΓΜͰ͍·͢ɻ%PDLFSʹΑ Γɺ7.ΑΓߴ͍ύϑΥʔϚϯεͱɺ %PDLFSpMFʹΑΔ*OGSBTUSVDUVSFBT $PEFͷ࣮ݱʹΑΓɺσʔλղੳͷ࠶
ݱੑΛ͞Βʹ্͢Δ͜ͱ͕Ͱ͖·͢ɻ কདྷతʹɺϢʔβχʔζʹ߹Θͤͨ ༷ʑͳܗͰͷԾڥͷΛߦͬͯ ͍͖·͢ɻ