Upgrade to Pro — share decks privately, control downloads, hide ads and more …

Large Scale Biological Data Science with Docker

Tazro Inutano Ohta
January 17, 2015
Science
4
30k

Large Scale Biological Data Science with Docker

Docker Meetup Tokyo #4 LT by @inutano

Tazro Inutano Ohta

January 17, 2015
Tweet

More Decks by Tazro Inutano Ohta

See All by Tazro Inutano Ohta
Yevis: System to support building a workflow registry with automated quality control
inutano
0
95
Standardization of biological sample information database
inutano
0
38
Describe data analysis workflow with workflow languages
inutano
4
3.7k
Container virtualization technologies and workflow languages improve portability and reproducibility of data analysis environment
inutano
3
310
次世代シーケンサーによるメタゲノム解析：桜の花びらに付着した環境DNAを解析する
inutano
0
63
Workflows that run everywhere and where to run them
inutano
0
130
The Sequence Read Archive search system to make use of public high-throughput sequencing data
inutano
0
220
Improve portability of bioinformatics software across HPC and cloud infrastructures
inutano
1
83
Container, Cloud, and HPC
inutano
0
140

Other Decks in Science

See All in Science
データで課題を解決する -因果関係を調べる統計的因果推論-
sshimizu2006
4
1.3k
Non-Gaussian methods for causal discovery
sshimizu2006
0
180
最新のAI技術を使った材料シミュレーションで材料研究現場に変革を
matlantis
0
420
AI(人工知能)の過去・現在・未来 —AIは人間を超えるのか—
tagtag
0
120
SIGDIAL論文読み会: PGTask: Introducing the Task of Profile Generation from Dialogues
kaiyo3
0
100
Transformer系機械学習モデルを取り巻くライブラリや用語を整理する
bobfromjapan
2
480
The Universe, How it works
arafkarsh
0
100
AI科学の何が“哲学”の問題になるのか　～問いマッピングの試み～
rmaruy
1
1.2k
FIBA W杯の日本代表って組み合わせ次第で2次ラウンド行けたんじゃね？をデータで検証
saltcooky12
0
200
2023-08-02_spatialLIBD_BioC2023_demo
lcolladotor
0
100
AI(人工知能)の過去・現在・未来 —AIは人間を超えるのか—
tagtag
1
190
「国と音楽」 ～spotifyrを用いて～ #muana
bob3bob3
2
330

Featured

See All Featured
Distributed Sagas: A Protocol for Coordinating Microservices
caitiem20
322
20k
Design and Strategy: How to Deal with People Who Don’t "Get" Design
morganepeng
116
18k
Visualizing Your Data: Incorporating Mongo into Loggly Infrastructure
mongodb
34
8.9k
Refactoring Trust on Your Teams (GOTO; Chicago 2020)
rmw
25
2.3k
A Philosophy of Restraint
colly
197
16k
Build The Right Thing And Hit Your Dates
maggiecrowley
24
2k
実際に使うSQLの書き方 徹底解説 / pgcon21j-tutorial
soudai
120
39k
個人開発の失敗を避けるイケてる考え方 / tips for indie hackers
panda_program
60
14k
For a Future-Friendly Web
brad_frost
172
9k
Facilitating Awesome Meetings
lara
42
5.6k
Testing 201, or: Great Expectations
jmmastey
28
6.3k
RailsConf 2023
tenderlove
3
540

Transcript

  1. Large Scale Biological Data Science with Docker ڞ༻εύίϯ্Ͱσʔλղੳ XJUI%PDLFS Tazro

    Inutano Ohta twitter.com/iNut github.com/inutano

  2. )&-1

  3. ΍͍ͬͯΔ͜ͱ ܭଌػث͕ େྔʹσʔλΛग़͢ 044Λ૊Έ߹Θͤͯ ϫʔΫϑϩʔΛ࡞Δ ڞ༻ܭࢉػͷ্Ͱ ΨϯΨϯճ͢

  4. ࠔ͍ͬͯΔ͜ͱ ਺ϲ݄ʙ೥Ͱ σʔλͷੑ࣭͕มΘΔ ιϑτ΢ΣΞͱ ϫʔΫϑϩʔΛ ॊೈʹมߋ͍ͨ͠ ؀ڥߏஙͩΔ͍

  5. Apache Mesos Scheduler Node Node Node Node Node 16#-*$-0$"- %0$,&33&(*453:

    %PDLFSGJMFT XPSLGMPXDPOGJH      ׬੒༧૝ਤ

  6. Thank You! twitter.com/iNut github.com/inutano