Upgrade to Pro — share decks privately, control downloads, hide ads and more …

Large Scale Biological Data Science with Docker

Avatar for Tazro Inutano Ohta Tazro Inutano Ohta
January 17, 2015
Science
4
31k

Large Scale Biological Data Science with Docker

Docker Meetup Tokyo #4 LT by @inutano

Avatar for Tazro Inutano Ohta

Tazro Inutano Ohta

January 17, 2015
Tweet

More Decks by Tazro Inutano Ohta

See All by Tazro Inutano Ohta
Yevis: System to support building a workflow registry with automated quality control
Avatar for Tazro Inutano Ohta inutano
0
140
Standardization of biological sample information database
Avatar for Tazro Inutano Ohta inutano
0
83
Describe data analysis workflow with workflow languages
Avatar for Tazro Inutano Ohta inutano
5
5.7k
Container virtualization technologies and workflow languages improve portability and reproducibility of data analysis environment
Avatar for Tazro Inutano Ohta inutano
3
350
次世代シーケンサーによるメタゲノム解析：桜の花びらに付着した環境DNAを解析する
Avatar for Tazro Inutano Ohta inutano
0
110
Workflows that run everywhere and where to run them
Avatar for Tazro Inutano Ohta inutano
0
170
The Sequence Read Archive search system to make use of public high-throughput sequencing data
Avatar for Tazro Inutano Ohta inutano
0
310
Improve portability of bioinformatics software across HPC and cloud infrastructures
Avatar for Tazro Inutano Ohta inutano
1
130
Container, Cloud, and HPC
Avatar for Tazro Inutano Ohta inutano
0
180

Other Decks in Science

See All in Science
Accelerating operator Sinkhorn iteration with overrelaxation
Avatar for Tasuku Soma tasusu
0
150
20251212_LT忘年会_データサイエンス枠_新川.pdf
Avatar for shinpsan shinpsan
0
220
HDC tutorial
Avatar for Michiel Stock michielstock
1
290
白金鉱業Vol.21【初学者向け発表枠】身近な例から学ぶ数理最適化の基礎 / Learning the Basics of Mathematical Optimization Through Everyday Examples
Avatar for BrainPad brainpadpr
1
510
A Guide to Academic Writing Using Generative AI - A Workshop
Avatar for Kenji Saito ks91
PRO
0
170
LayerXにおける業務の完全自動運転化に向けたAI技術活用事例 / layerx-ai-jsai2025
Avatar for shimacos shimacos
2
21k
People who frequently use ChatGPT for writing tasks are accurate and robust detectors of AI-generated text
Avatar for hajime kiyama rudorudo11
0
170
機械学習 - K近傍法 & 機械学習のお作法
Avatar for Y. Yamamoto trycycle
PRO
0
1.3k
イロレーティングを活用した関東大学サッカーの定量的実力評価 / A quantitative performance evaluation of Kanto University Football Association using Elo rating
Avatar for konakalab konakalab
0
160
academist Prize 4期生 研究トーク延長戦！「美は世界を救う」っていうけど、どうやって？
Avatar for Jimpei jimpe_hitsuwari
0
460
なぜ21は素因数分解されないのか？ - Shorのアルゴリズムの現在と壁
Avatar for Daiki Murata daimurat
0
250
データベース11: 正規化(1/2) - 望ましくない関係スキーマ
Avatar for Y. Yamamoto trycycle
PRO
0
1k

Featured

See All Featured
Primal Persuasion: How to Engage the Brain for Learning That Lasts
Avatar for Mike Taylor tmiket
0
200
How to Build an AI Search Optimization Roadmap - Criteria and Steps to Take #SEOIRL
Avatar for Aleyda Solis aleyda
1
1.8k
Designing for Performance
Avatar for Lara Hogan lara
610
70k
Have SEOs Ruined the Internet? - User Awareness of SEO in 2025
Avatar for Akash Hashmi akashhashmi
0
230
Chrome DevTools: State of the Union 2024 - Debugging React & Beyond
Avatar for Addy Osmani addyosmani
9
1k
brightonSEO & MeasureFest 2025 - Christian Goodrich - Winning strategies for Black Friday CRO & PPC
Avatar for Christian Goodrich cargoodrich
2
78
The Power of CSS Pseudo Elements
Avatar for Geoffrey Crofte geoffreycrofte
80
6.1k
Game over? The fight for quality and originality in the time of robots
Avatar for Wayne Barker wayneb77
1
74
Making Projects Easy
Avatar for Brett Harned brettharned
120
6.5k
Performance Is Good for Brains [We Love Speed 2024]
Avatar for Tammy Everts tammyeverts
12
1.4k
How to Talk to Developers About Accessibility
Avatar for Jason CranfordTeague jct
1
94
The Art of Programming - Codeland 2020
Avatar for Erika Heidi erikaheidi
56
14k

Transcript

  1. Large Scale Biological Data Science with Docker ڞ༻εύίϯ্Ͱσʔλղੳ XJUI%PDLFS Tazro

    Inutano Ohta twitter.com/iNut github.com/inutano

  2. )&-1

  3. ΍͍ͬͯΔ͜ͱ ܭଌػث͕ େྔʹσʔλΛग़͢ 044Λ૊Έ߹Θͤͯ ϫʔΫϑϩʔΛ࡞Δ ڞ༻ܭࢉػͷ্Ͱ ΨϯΨϯճ͢

  4. ࠔ͍ͬͯΔ͜ͱ ਺ϲ݄ʙ೥Ͱ σʔλͷੑ࣭͕มΘΔ ιϑτ΢ΣΞͱ ϫʔΫϑϩʔΛ ॊೈʹมߋ͍ͨ͠ ؀ڥߏஙͩΔ͍

  5. Apache Mesos Scheduler Node Node Node Node Node 16#-*$-0$"- %0$,&33&(*453:

    %PDLFSGJMFT XPSLGMPXDPOGJH      ׬੒༧૝ਤ

  6. Thank You! twitter.com/iNut github.com/inutano