Upgrade to Pro — share decks privately, control downloads, hide ads and more …

Large Scale Biological Data Science with Docker

Tazro Inutano Ohta
January 17, 2015
Science
4
30k

Large Scale Biological Data Science with Docker

Docker Meetup Tokyo #4 LT by @inutano

Tazro Inutano Ohta

January 17, 2015
Tweet

More Decks by Tazro Inutano Ohta

See All by Tazro Inutano Ohta
Yevis: System to support building a workflow registry with automated quality control
inutano
0
100
Standardization of biological sample information database
inutano
0
54
Describe data analysis workflow with workflow languages
inutano
5
4.6k
Container virtualization technologies and workflow languages improve portability and reproducibility of data analysis environment
inutano
3
320
次世代シーケンサーによるメタゲノム解析：桜の花びらに付着した環境DNAを解析する
inutano
0
76
Workflows that run everywhere and where to run them
inutano
0
130
The Sequence Read Archive search system to make use of public high-throughput sequencing data
inutano
0
250
Improve portability of bioinformatics software across HPC and cloud infrastructures
inutano
1
94
Container, Cloud, and HPC
inutano
0
150

Other Decks in Science

See All in Science
butterfly_effect/butterfly_effect_in-house
florets1
1
110
Analysis-Ready Cloud-Optimized Data for your community and the entire world with Pangeo-Forge
jbusecke
0
110
20分で分かる Human-in-the-Loop 機械学習におけるアノテーションとヒューマンコンピューターインタラクションの真髄
hurutoriya
5
2.5k
メール送信サーバの集約における透過型SMTP プロキシの定量評価 / Quantitative Evaluation of Transparent SMTP Proxy in Email Sending Server Aggregation
linyows
0
430
(論文読み)贈り物の交換による地位の競争と社会構造の変化 - 文化人類学への統計物理学的アプローチ -
__ymgc__
1
130
All-in-One Bioinformatics Platform Realized with Snowflake ~ From In Silico Drug Discovery, Disease Variant Analysis, to Single-Cell RNA-seq
ktatsuya
PRO
0
260
Mechanistic Interpretability の紹介
sohtakahashi
0
410
ultraArmをモニター提供してもらった話
miura55
0
200
WeMeet Group - 採用資料
wemeet
0
3.7k
創薬における機械学習技術について
kanojikajino
13
4.7k
ACL読み会2024@名大 REANO: Optimising Retrieval-Augmented Reader Models through Knowledge Graph Generation
takuma_matsubara
0
100
WCS-LA-2024
lcolladotor
0
140

Featured

See All Featured
Principles of Awesome APIs and How to Build Them.
keavy
126
17k
The Cult of Friendly URLs
andyhume
78
6.1k
Templates, Plugins, & Blocks: Oh My! Creating the theme that thinks of everything
marktimemedia
28
2.1k
Performance Is Good for Brains [We Love Speed 2024]
tammyeverts
6
520
ピンチをチャンスに：未来をつくるプロダクトロードマップ #pmconf2020
aki_iinuma
111
49k
The Art of Programming - Codeland 2020
erikaheidi
53
13k
Agile that works and the tools we love
rasmusluckow
328
21k
Thoughts on Productivity
jonyablonski
67
4.4k
A Modern Web Designer's Workflow
chriscoyier
693
190k
CSS Pre-Processors: Stylus, Less & Sass
bermonpainter
356
29k
The Success of Rails: Ensuring Growth for the Next 100 Years
eileencodes
44
6.9k
Building a Modern Day 
E-commerce SEO Strategy
aleyda
38
7k

Transcript

  1. Large Scale Biological Data Science with Docker ڞ༻εύίϯ্Ͱσʔλղੳ XJUI%PDLFS Tazro

    Inutano Ohta twitter.com/iNut github.com/inutano

  2. )&-1

  3. ΍͍ͬͯΔ͜ͱ ܭଌػث͕ େྔʹσʔλΛग़͢ 044Λ૊Έ߹Θͤͯ ϫʔΫϑϩʔΛ࡞Δ ڞ༻ܭࢉػͷ্Ͱ ΨϯΨϯճ͢

  4. ࠔ͍ͬͯΔ͜ͱ ਺ϲ݄ʙ೥Ͱ σʔλͷੑ࣭͕มΘΔ ιϑτ΢ΣΞͱ ϫʔΫϑϩʔΛ ॊೈʹมߋ͍ͨ͠ ؀ڥߏஙͩΔ͍

  5. Apache Mesos Scheduler Node Node Node Node Node 16#-*$-0$"- %0$,&33&(*453:

    %PDLFSGJMFT XPSLGMPXDPOGJH      ׬੒༧૝ਤ

  6. Thank You! twitter.com/iNut github.com/inutano