HiGlass & Friends

Overview of HiGlass (https://higlass.io) developments in 2019 presented at the NIH Common Fund 4D Nucleome Annual Meeting.

Transcript

1. HiGlass & Friends
   Nils Gehlenborg
   Harvard Medical School
   @ngehlenborg
   

   View Slide

2. Peter Kerpedjiev
   Zymergen
   @pkerpedjiev
   Nezar Abdennur
   MIT
   @nv1ctus
   Fritz Lekschas
   Harvard
   @flekschas
   

   View Slide

3. New
   HiGlass
   Features
   

   View Slide

4. http://higlass.io
   Split
   Matrix
   View
   

   View Slide

5. http://higlass.io
   Built-In
   View
   Config
   Editor
   

   View Slide

6. http://higlass.io
   Cross Track
   Annotations
   

   View Slide

7. http://higlass.io
   Cross Track
   Annotations
   

   View Slide

8. https://flekschas.github.io/higlass-fancy/
   Cross Track
   Annotations
   

   View Slide

9. New
   HiGlass-based
   Tools
   

   View Slide

10. http://peax.lekschas.de
    PEAX
    Harvard +
    Novartis
    

    View Slide

11. https://epilogos.altius.org
    Epilogos
    Altius
    Institute
    

    View Slide

12. http://scalable-insets.lekschas.de
    Scalable
    Insets
    Harvard
    

    View Slide

13. https://onlinelibrary.wiley.com/doi/epdf/10.1111/cgf.13727
    Tasks,
    Techniques,
    and Tools for
    Genomic Data
    Visualization
    

    View Slide

14. https://onlinelibrary.wiley.com/doi/epdf/10.1111/cgf.13727
    Tasks,
    Techniques,
    and Tools for
    Genomic Data
    Visualization
    

    View Slide

15. https://github.com/higlass/higlass-python
    higlass-
    python
    

    View Slide

16. https://github.com/higlass/scipy19
    SciPy 2019
    Talk + Demo
    

    View Slide

17. https://www.youtube.com/watch?v=v62k4Ok1S8g&feature=youtu.be&t=1489
    Jupyter
    Notebook
    Integration
    

    View Slide

18. New
    HiGlass
    News
    

    View Slide

19. https://twitter.com/higlass_io
    Follow
    @higlass_io
    

    View Slide

20. https://twitter.com/higlass_io
    Follow
    @higlass_io
    

    View Slide