Ideas for the IPT: An INBO perspective

6f6914b1cdb438695ec1aaabba7463bb?s=47 Peter Desmet
September 24, 2020

Ideas for the IPT: An INBO perspective

Talk at the TDWG 2020 virtual conference - September 24, 2020. Discusses ideas for the GBIF Integrated Publishing Toolkit (IPT) in the session "WS01: BioCASe & IPT: Part 1" (https://www.tdwg.org/conferences/2020/working-sessions-schedule/)

Video: https://youtu.be/hU1I1ER9qLw?t=4258

6f6914b1cdb438695ec1aaabba7463bb?s=128

Peter Desmet

September 24, 2020
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  1. 24 September 2020, TDWG conference Peter Desmet Ideas for the

    IPT An INBO perspective
  2. Hi!

  3. We publish data to GBIF & Zenodo 30 73

  4. As well as other platforms 8 17

  5. Data

  6. Darwin Core mapping •  Almost always too complex for IPT

    interface: – SQL view – R script •  Documented •  Versioned
  7. Darwin Core mapping review •  Review by colleague: – Valid DwC-A?

    – Clear to outside user? – As agreed? •  Documented/tested as whip specifications Whip specifications github.com/inbo/whip
  8. Support iterative review •  Generate DwC-A without publishing •  Plug-in

    validation
  9. Metadata

  10. Rethink metadata •  12 metadata tabs in the IPT • 

    All seem to have equal importance
  11. Focus on basic metadata •  Focus on required metadata • 

    Collapse optional metadata
  12. Basic metadata •  DOI •  Publisher •  Language •  Resource

    type •  License •  Title •  Creators (authors) •  Description (abstract) •  Subjects (keywords) •  Publication date DataCite Metadata Schema schema.datacite.org/meta/kernel-4.3/
  13. Basic metadata Is what appears on other platforms

  14. Additional metadata •  Indicate as optional •  Coverage: derive from

    data •  Methodology: mostly as data paper
  15. Support collaboration/review •  Review by collaborators: – Author list – Description – Methodology

    •  IPT better at this than Zenodo
  16. Improve usability •  Authors – Name, affiliation, ORCID – Allow reordering – Author

    registry •  Metadata templates •  Dataset status
  17. Publication

  18. Deposit in research repository •  IPTs should not be long-term

    repositories •  Use: – Zenodo – DataONE member – Institutional
  19. Versioning •  Updated data = new version •  Updated metadata

    != new version •  Each version has DOI •  One version-less DOI
  20. Registration •  Keep separate from publication •  Single registry • 

    Allow registration with multiple communities – GBIF, OBIS, project, …
  21. Thank you! Peter Desmet (2020) Ideas for the IPT: An

    INBO perspective. Presentation. http://bit.ly/inbo-ipt-ideas @oscibio Open science lab for biodiversity oscibio.inbo.be @peterdesmet