$30 off During Our Annual Pro Sale. View Details »
Speaker Deck
Features
Speaker Deck
PRO
Sign in
Sign up for free
Search
Search
How to read DNA?
Search
Vladimir Kiselev
March 04, 2015
Education
0
190
How to read DNA?
Presentation for pupils at the Babraham Institute School Day
Vladimir Kiselev
March 04, 2015
Tweet
Share
More Decks by Vladimir Kiselev
See All by Vladimir Kiselev
Nextflow at the heart of UK genomics
wikiselev
0
250
Development And Operation Of Workflows, Tools And Infrastructure For Data Analysis
wikiselev
1
170
Utilize Kubernetes on OpenStack
wikiselev
2
240
OpenStack, Kubernetes and Nextflow
wikiselev
1
770
Single-cell RNA-sequencing
wikiselev
1
260
scmap – projection of single-cell RNA-seq data across datasets
wikiselev
0
290
SC3 - consensus clustering of single-cell RNA-Seq data
wikiselev
0
1.1k
Overview of RNA-Sequencing and Its Applications
wikiselev
0
120
RNA-Seq Analysis Reveals a Transcriptional Feedback Loop in EGF-PIP3 Signalling
wikiselev
0
180
Other Decks in Education
See All in Education
Master of Applied Science & Engineering: Computer Science & Master of Science in Applied Informatics: Artificial Intelligence and Data Science
signer
PRO
0
860
コマンドラインを見直そう(1995年からタイムリープ)
sapi_kawahara
0
590
SJRC 2526
cbtlibrary
0
160
【ZEPメタバース校舎操作ガイド】
ainischool
0
690
~キャラ付け考えていますか?~ AI時代だからこそ技術者に求められるセルフブランディングのすゝめ
masakiokuda
7
540
多様なメンター、多様な基準
yasulab
5
19k
1014
cbtlibrary
0
500
自分だけの、誰も想像できないキャリアの育て方 〜偶然から始めるキャリアプラン〜 / Career planning starting by luckly v2
vtryo
1
330
【ZEPホスト用メタバース校舎操作ガイド】
ainischool
0
150
卒論の書き方 / Happy Writing
kaityo256
PRO
50
27k
Introdución ás redes
irocho
0
510
Sanapilvet opetuksessa
matleenalaakso
0
34k
Featured
See All Featured
It's Worth the Effort
3n
187
29k
Typedesign – Prime Four
hannesfritz
42
2.9k
How to Think Like a Performance Engineer
csswizardry
28
2.4k
Designing for Performance
lara
610
69k
Stop Working from a Prison Cell
hatefulcrawdad
273
21k
[RailsConf 2023] Rails as a piece of cake
palkan
58
6.2k
Visualizing Your Data: Incorporating Mongo into Loggly Infrastructure
mongodb
48
9.8k
How to Create Impact in a Changing Tech Landscape [PerfNow 2023]
tammyeverts
55
3.1k
Context Engineering - Making Every Token Count
addyosmani
9
530
Optimizing for Happiness
mojombo
379
70k
The Power of CSS Pseudo Elements
geoffreycrofte
80
6.1k
[Rails World 2023 - Day 1 Closing Keynote] - The Magic of Rails
eileencodes
37
2.7k
Transcript
H O W T O R E A D D
N A ?
H E L A C E L L S (
W H Y H E L A ? )
H E L A C E L L S It
is the oldest and most commonly used human cell line. It was derived from cervical cancer cells taken on February 8, 1951, from Henrietta Lacks, a patient who eventually died of her cancer on October 4, 1951.
Let us assume you managed to extract the DNA from
HELA cells D N A
D N A S
D N A I S V E RY L O
N G
D N A S O U P
T H E N E W S PA P E
R P R O B L E M
T H E N E W S PA P E
R P R O B L E M
B A C K T O B I O L
O G Y ? Bioinformatics Bioinformatics Biology Biology Biology
O V E R L A P P I N
G I S E A S Y (if the sequence is known)
O V E R L A P P I N
G I S H A R D (if the sequence is unknown) Find a path in the de Bruijn graph that visits every edge exactly once - Eulerian path
W H AT I S T H E FA S
T E S T M A M M A L ?
S O , W H AT D I D J
U N E 2 7 , 2 0 0 0 N Y T I M E S S AY ?
S O , W H AT D I D J
U N E 2 7 , 2 0 0 0 N Y T I M E S S AY ?
T H A N K Y O U ! Presentation
is based on materials from https://www.coursera.org/course/bioinformatics