Upgrade to Pro
— share decks privately, control downloads, hide ads and more …
Speaker Deck
Features
Speaker Deck
PRO
Sign in
Sign up for free
Search
Search
How to read DNA?
Search
Vladimir Kiselev
March 04, 2015
Education
0
190
How to read DNA?
Presentation for pupils at the Babraham Institute School Day
Vladimir Kiselev
March 04, 2015
Tweet
Share
More Decks by Vladimir Kiselev
See All by Vladimir Kiselev
Nextflow at the heart of UK genomics
wikiselev
0
240
Development And Operation Of Workflows, Tools And Infrastructure For Data Analysis
wikiselev
1
160
Utilize Kubernetes on OpenStack
wikiselev
2
210
OpenStack, Kubernetes and Nextflow
wikiselev
1
710
Single-cell RNA-sequencing
wikiselev
1
250
scmap – projection of single-cell RNA-seq data across datasets
wikiselev
0
260
SC3 - consensus clustering of single-cell RNA-Seq data
wikiselev
0
1.1k
Overview of RNA-Sequencing and Its Applications
wikiselev
0
110
RNA-Seq Analysis Reveals a Transcriptional Feedback Loop in EGF-PIP3 Signalling
wikiselev
0
160
Other Decks in Education
See All in Education
2025.05.10 技術書とVoicyとわたし #RPALT
kaitou
1
210
Dashboards - Lecture 11 - Information Visualisation (4019538FNR)
signer
PRO
1
2k
Data Physicalisation - Lecture 9 - Next Generation User Interfaces (4018166FNR)
signer
PRO
0
430
Avoin jakaminen ja Creative Commons -lisenssit
matleenalaakso
0
1.9k
미국 교환학생 가서 무료 홈스테이 살면서 인턴 취업하기
maryang
0
110
著作権と授業に関する出前講習会/dme-2025-05-01
gnutar
0
200
Pythonパッケージ管理 [uv] 完全入門
mickey_kubo
20
13k
Interaction - Lecture 10 - Information Visualisation (4019538FNR)
signer
PRO
0
2k
2025年度春学期 統計学 第2回 統計資料の収集と読み方(講義前配付用) (2025. 4. 17)
akiraasano
PRO
0
140
2025年度春学期 統計学 第3回 クロス集計と感度・特異度,データの可視化 (2025. 4. 24)
akiraasano
PRO
0
120
生成AI
takenawa
0
4k
Sponsor the Conference | VizChitra 2025
vizchitra
0
540
Featured
See All Featured
How to train your dragon (web standard)
notwaldorf
92
6.1k
Building an army of robots
kneath
306
45k
Save Time (by Creating Custom Rails Generators)
garrettdimon
PRO
31
1.2k
Designing Dashboards & Data Visualisations in Web Apps
destraynor
231
53k
How GitHub (no longer) Works
holman
314
140k
"I'm Feeling Lucky" - Building Great Search Experiences for Today's Users (#IAC19)
danielanewman
228
22k
Visualizing Your Data: Incorporating Mongo into Loggly Infrastructure
mongodb
46
9.6k
Keith and Marios Guide to Fast Websites
keithpitt
411
22k
Cheating the UX When There Is Nothing More to Optimize - PixelPioneers
stephaniewalter
281
13k
Fireside Chat
paigeccino
37
3.5k
The Art of Programming - Codeland 2020
erikaheidi
54
13k
Optimizing for Happiness
mojombo
379
70k
Transcript
H O W T O R E A D D
N A ?
H E L A C E L L S (
W H Y H E L A ? )
H E L A C E L L S It
is the oldest and most commonly used human cell line. It was derived from cervical cancer cells taken on February 8, 1951, from Henrietta Lacks, a patient who eventually died of her cancer on October 4, 1951.
Let us assume you managed to extract the DNA from
HELA cells D N A
D N A S
D N A I S V E RY L O
N G
D N A S O U P
T H E N E W S PA P E
R P R O B L E M
T H E N E W S PA P E
R P R O B L E M
B A C K T O B I O L
O G Y ? Bioinformatics Bioinformatics Biology Biology Biology
O V E R L A P P I N
G I S E A S Y (if the sequence is known)
O V E R L A P P I N
G I S H A R D (if the sequence is unknown) Find a path in the de Bruijn graph that visits every edge exactly once - Eulerian path
W H AT I S T H E FA S
T E S T M A M M A L ?
S O , W H AT D I D J
U N E 2 7 , 2 0 0 0 N Y T I M E S S AY ?
S O , W H AT D I D J
U N E 2 7 , 2 0 0 0 N Y T I M E S S AY ?
T H A N K Y O U ! Presentation
is based on materials from https://www.coursera.org/course/bioinformatics