Upgrade to Pro
— share decks privately, control downloads, hide ads and more …
Speaker Deck
Features
Speaker Deck
PRO
Sign in
Sign up for free
Search
Search
How to read DNA?
Search
Vladimir Kiselev
March 04, 2015
Education
0
190
How to read DNA?
Presentation for pupils at the Babraham Institute School Day
Vladimir Kiselev
March 04, 2015
Tweet
Share
More Decks by Vladimir Kiselev
See All by Vladimir Kiselev
Nextflow at the heart of UK genomics
wikiselev
0
250
Development And Operation Of Workflows, Tools And Infrastructure For Data Analysis
wikiselev
1
170
Utilize Kubernetes on OpenStack
wikiselev
2
230
OpenStack, Kubernetes and Nextflow
wikiselev
1
760
Single-cell RNA-sequencing
wikiselev
1
260
scmap – projection of single-cell RNA-seq data across datasets
wikiselev
0
280
SC3 - consensus clustering of single-cell RNA-Seq data
wikiselev
0
1.1k
Overview of RNA-Sequencing and Its Applications
wikiselev
0
120
RNA-Seq Analysis Reveals a Transcriptional Feedback Loop in EGF-PIP3 Signalling
wikiselev
0
180
Other Decks in Education
See All in Education
Node-REDで広がるプログラミング教育の可能性
ueponx
0
180
Evaluation Methods - Lecture 6 - Human-Computer Interaction (1023841ANR)
signer
PRO
0
1.2k
IKIGAI World Fes:program
tsutsumi
1
2.5k
今の私を形作る4つの要素と偶然の出会い(セレンディピティ)
mamohacy
2
120
HCI and Interaction Design - Lecture 2 - Human-Computer Interaction (1023841ANR)
signer
PRO
0
1.4k
H5P-työkalut
matleenalaakso
4
41k
The knowledge panel is your new homepage
bradwetherall
0
210
Editor First: Customizing TYPO3 for a Cleaner Workflow
ulli
0
110
DIP_1_Introduction
hachama
0
320
中間活動報告会 人材育成WG・技術サブWG / 20250808-oidfj-eduWG-techSWG
oidfj
0
830
附属科学技術高等学校の概要|Science Tokyo(東京科学大学)
sciencetokyo
PRO
0
2.1k
20250910_エンジニアの成長は自覚するところから_サポーターズ勉強会
ippei0923
0
330
Featured
See All Featured
The Psychology of Web Performance [Beyond Tellerrand 2023]
tammyeverts
49
3.2k
Typedesign – Prime Four
hannesfritz
42
2.9k
Speed Design
sergeychernyshev
32
1.2k
RailsConf 2023
tenderlove
30
1.3k
10 Git Anti Patterns You Should be Aware of
lemiorhan
PRO
658
61k
Exploring the Power of Turbo Streams & Action Cable | RailsConf2023
kevinliebholz
36
6.1k
Let's Do A Bunch of Simple Stuff to Make Websites Faster
chriscoyier
508
140k
Fantastic passwords and where to find them - at NoRuKo
philnash
52
3.5k
Visualization
eitanlees
150
16k
No one is an island. Learnings from fostering a developers community.
thoeni
21
3.5k
Templates, Plugins, & Blocks: Oh My! Creating the theme that thinks of everything
marktimemedia
31
2.6k
Bash Introduction
62gerente
615
210k
Transcript
H O W T O R E A D D
N A ?
H E L A C E L L S (
W H Y H E L A ? )
H E L A C E L L S It
is the oldest and most commonly used human cell line. It was derived from cervical cancer cells taken on February 8, 1951, from Henrietta Lacks, a patient who eventually died of her cancer on October 4, 1951.
Let us assume you managed to extract the DNA from
HELA cells D N A
D N A S
D N A I S V E RY L O
N G
D N A S O U P
T H E N E W S PA P E
R P R O B L E M
T H E N E W S PA P E
R P R O B L E M
B A C K T O B I O L
O G Y ? Bioinformatics Bioinformatics Biology Biology Biology
O V E R L A P P I N
G I S E A S Y (if the sequence is known)
O V E R L A P P I N
G I S H A R D (if the sequence is unknown) Find a path in the de Bruijn graph that visits every edge exactly once - Eulerian path
W H AT I S T H E FA S
T E S T M A M M A L ?
S O , W H AT D I D J
U N E 2 7 , 2 0 0 0 N Y T I M E S S AY ?
S O , W H AT D I D J
U N E 2 7 , 2 0 0 0 N Y T I M E S S AY ?
T H A N K Y O U ! Presentation
is based on materials from https://www.coursera.org/course/bioinformatics