do not capture assembly quality • Consider also misassemblies, base-level accuracy, and your scientific goals • Mauve and Nucmer are tools to assess assembly quality • Quiver can be used to polish assemblies Where to Find More Information • Mauve: http://gel.ahabs.wisc.edu/mauve/ • Nucmer: http://mummer.sourceforge.net/ • Quiver: https://github.com/PacificBiosciences/GenomicConsensus/blob/master/ doc/HowToQuiver.rst